PrimeKG
Precision medicine knowledge graph integrating 20 sources for 17k diseases.
Composite score: 91.9
Rubric (1–5 per criterion)
rigor
5/5
coverage
5/5
maintenance
4/5
adoption
4/5
quality
5/5
accessibility
5/5
industry_relevance
4/5
Metadata
Stages
Disease ModelingTarget ID
Modalities
cross-modality
Task types
knowledge-graphdrug-repurposing
License
MIT
First release
2023-03
Last updated
2025-02
Flags
none
Size & scope
- nodes: 129375
- edges: 8100498
- diseases: 17080
Primary paper
Title
Building a knowledge graph to enable precision medicine
Authors
Chandak P, Huang K, Zitnik M
Year
2023
DOI / arXiv
Citations
320
Links
- Official site: https://zitniklab.hms.harvard.edu/projects/PrimeKG/
- GitHub: https://github.com/mims-harvard/PrimeKG
- Leaderboard: N/A
Hosted by (initiatives)
Experts (primary authors / maintainers)
Groups (host labs / companies / consortia)
Related benchmarks
Notes (honest caveats)
Modern, well-engineered KG; strong for GNN drug repurposing.